BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D03LP1|AL427150
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1272 1876 0.0
>3x_Contig1272
Length = 8315
Score = 1876 bits (944), Expect = 0.0
Identities = 961/968 (99%), Gaps = 1/968 (0%)
Strand = Plus / Minus
Query: 4 tcttagaccacttcttcttggacttcttaccaccagccatggcagcggcggccttagcgg 63
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6428 tcttagaccacttcttcttggacctcttaccaccagccatggcagcggcggccttagcgg 6369
Query: 64 ctttggacaattgttgttttggaggcatatttctgcggaaaagggaacgttaagttcggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6368 ctttggacaattgttgttttggaggcatatttctgcggaaaagggaacgttaagttcggt 6309
Query: 124 attgttagtaaaaaattgattctttatgaagaggggtgtagtgagaagtagcacatcact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6308 attgttagtaaaaaattgattctttatgaagaggggtgtagtgagaagtagcacatcact 6249
Query: 184 tagtaaatttgtcgcaagtycgactaatgacgagagaatttttctgatagatagcttgtc 243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6248 tagtaaatttgtcgcaagtccgactaatgacgagagaatttttctgatagatagcttgtc 6189
Query: 244 aatttgaatgaatccttactttccagcaaattcacccaaattatagaatctggtttccta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6188 aatttgaatgaatccttactttccagcaaattcacccaaattatagaatctggtttccta 6129
Query: 304 agaaatatttgctggcagttccattgggctatatcaccaaataacaaaaagctgcattat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6128 agaaatatttgctggcagttccattgggctatatcaccaaataacaaaaagctgcattat 6069
Query: 364 tcagtacacttttaatcctgatgccatagtacgatgatcaatacaatgttggagagaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6068 tcagtacacttttaatcctgatgccatagtacgatgatcaatacaatgttggagagaaaa 6009
Query: 424 ttatcaatccgtccacaaaatatctctggtaaatgttgtttcagtataactggtgttgtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6008 ttatcaatccgtccacaaaatatctctggtaaatgttgtttcagtataactggtgttgtt 5949
Query: 484 tcatttgtcatcactatcaataaattaacattagaacctcttcctgattcatatatctat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5948 tcatttgtcatcactatcaataaattaacattagaacctcttcctgattcatatatctat 5889
Query: 544 cttattcttgtataatcctcgatatcagacctcgtgctggttttattttgttatctcttt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5888 cttattcttgtataatcctcgatatcagacctcgtgctggttttattttgttatctcttt 5829
Query: 604 catcgtaatcccaaaagtgctattccaaataagttaccactgctagtacacggcacatac 663
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5828 catcgtaatcccaaaagtgctattccaaataagtaaccactgctagtacacggcacatac 5769
Query: 664 gttcaaattcccttagctggtttcttcttgaatgaactcaaaagtaaatwaccctataat 723
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5768 gttcaaattcccttagctggtttcttcttgaatgaactcaaaagtaaataaccctataat 5709
Query: 724 aatcaaggtgctactttaaacaacttgttaatatctctaagttgcaattcaatgtaaatc 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5708 aatcaaggtgctactttaaacaacttgttaatatctctaagttgcaattcaatgtaaatc 5649
Query: 784 aaaaaatgaatattcaatccgaagtgagtttgtccaggacgcaaagtattcctcttccta 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5648 aaaaaatgaatattcaatccgaagtgagtttgtccaggacgcaaagtattcctcttccta 5589
Query: 844 ccggagaagcagagaaagtkaagcaggataacgaggattgcgacaaatggactcattttg 903
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5588 ccggagaagcagagaaagtgaagcaggataacgaggattgcgacaaatggactcattttg 5529
Query: 904 gaaaggagataatttcctctttaggaaggraataacgcatgag-aaatatacaaagttca 962
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 5528 gaaaggagataatttcctctttaggaaggaaataacgcatgagaaaatatacaaagttca 5469
Query: 963 actttcgg 970
||||||||
Sbjct: 5468 actttcgg 5461
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8053
Number of Sequences: 1807
Number of extensions: 8053
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)